PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00506.1.g00120.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 306aa    MW: 32588.3 Da    PI: 6.9045
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00506.1.g00120.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.34.9e-3187145259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
  Zpz_sc00506.1.g00120.1.sm.mk  87 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPSMLIITYTSDHNHP 145
                                   699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.51281147IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-3184147IPR003657WRKY domain
SuperFamilySSF1182902.75E-2684147IPR003657WRKY domain
SMARTSM007743.8E-3786146IPR003657WRKY domain
PfamPF031065.0E-2688145IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MIQHVISGPP PQLLGAAGVA DLRECDVAAP EMDEHGLDMA MDAHPHHAAV IKSRKSQAKK  60
VVCIPAPTAA PLGVGGRPST GGEVVPSDLW AWRKYGQKPI KGSPYPRGYY RCSSSKGCSA  120
RKQVERSRTD PSMLIITYTS DHNHPWPTQR NALAGSTRPA ASSSAASKSH PSIGAVVPPP  180
PSLHHHTTGV AGDSGLSNSI GDDVHHQVPK KEVIDVMDHR RAEQDAAAGG DHGLDMLANM  240
DGAINTVPAS NFNPQNQQQH AIAGDDDHHL EQDDKQQLFD PVSFVFLDSW VGASFRIGDA  300
NKGGYT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A2e-17881471977Probable WRKY transcription factor 4
1wj2_A2e-17881471977Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008658838.11e-102PREDICTED: probable WRKY transcription factor 35
TrEMBLA0A096TIF51e-102A0A096TIF5_MAIZE; Uncharacterized protein
STRINGGRMZM2G383594_P011e-101(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118473039
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.13e-58WRKY DNA-binding protein 35